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StoneHingeP Prediction
Hiv-1 Reverse Transcriptase (va1hvuA-1hquB)
Coordination level 2.425101 used for prediction.
H-bond energy level is 2.77301 kcal/mol.
Protein is 66.6% rigidRigid cluster 1 (116 residues): 96-101, 227-241, 314-356, 363-405, 411-417, 422-423
Rigid cluster 2 (110 residues): 10-13, 26-50, 57-65, 70-85, 113-133, 141-175
Hinge Flexibility Coordinated Residues 85 - 96 2.1525 -0.0875 86-87, 90, 92, 95 101 - 113 3.4375 -0.0875 103-104, 111 175 - 227 15.3225 -0.0875 176-178, 192, 211, 219-220, 223-224 The hydrogen bond dilution plot for this protein may be found here.
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Copyright 1995-2005 M. Gerstein, W. Krebs, S. Flores, N. Echols, and others
Email: Mark.Gerstein _at_ yale.edu