Motion in P4-P6 Domain from Group-I Intron (a large RNA) [p4p6]

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Classification Known RNA Motion [N-R-2]

1GID Both Conformations

Comparison of both molecules in the asymmetric unit reveals significant conformation change.

Particular values describing motion
Creation Date = 19971212
Experimental Methods = x (Traditional x-ray)
Modification Date = 1998-10-23 15:09:16.000

Cate JH, Gooding AR, Podell E, Zhou K, Golden BL, Kundrot CE, Cech TR, Doudna JA. (1996) Crystal structure of a group I ribozyme domain: principles of RNA packing. Science, 273:1678-85. [Medline info for 8781224]
Nussinov R, Jacobson AB (1980). Fast algorithm for predicting the secondary structure of single-stranded RNA. Proc Natl Acad Sci U S A 77(11):6903-6913 [Medline info for 6161375]
Nussinov et al. (1978) SIAM J App Math 35: 68-72 [Medline info for 6161375]

Data and Graphics
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Graphic Fold of the RNA


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Best representative
Morph Morph name Structure #1 Structure #2 Residues
Group I intron 1GID [ ] 1GID [ ] 158

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Copyright 1995-2005 M. Gerstein, W. Krebs, S. Flores, N. Echols, and others
Email: Mark.Gerstein _at_